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rsmI protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"rsmI" - uroporphyrin-III C/tetrapyrrole in Dehalogenimonas lykanthroporepellens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rsmIuroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (272 aa)    
Predicted Functional Partners:
Dehly_0455
uroporphyrin-III C-methyltransferase (504 aa)
       
    0.903
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (556 aa)
   
   
  0.801
Dehly_1270
Hypothetical protein (71 aa)
              0.725
Dehly_1268
Hypothetical protein (236 aa)
              0.692
Dehly_1267
Rieske (2Fe-2S) domain-containing protein (135 aa)
              0.692
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (261 aa)
 
 
  0.647
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (306 aa)
   
   
  0.643
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA (239 aa)
 
   
  0.639
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA (356 aa)
 
   
  0.618
Dehly_0693
DNA-directed DNA polymerase subunit delta’ (339 aa)
 
        0.607
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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