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Dehly_1296 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1296" - ABC-2 type transporter in Dehalogenimonas lykanthroporepellens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_1296ABC-2 type transporter (351 aa)    
Predicted Functional Partners:
Dehly_1295
ABC transporter-like protein (288 aa)
              0.876
Dehly_1297
ABC-2 type transporter (355 aa)
           
0.870
Dehly_1294
TetR family transcriptional regulator (212 aa)
              0.863
Dehly_1293
Multidrug transporter ABC transporter permease (263 aa)
              0.859
Dehly_1292
Putative ABC-2 type transporter permease (264 aa)
              0.859
Dehly_1291
ABC transporter-like protein (293 aa)
              0.752
Dehly_1290
Short-chain dehydrogenase/reductase SDR (264 aa)
              0.492
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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