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Dehly_1310 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1310" - Rhomboid family protein in Dehalogenimonas lykanthroporepellens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_1310Rhomboid family protein (191 aa)    
Predicted Functional Partners:
Dehly_1311
Hypothetical protein (56 aa)
              0.622
Dehly_1309
Response regulator receiver protein (129 aa)
              0.507
Dehly_0506
Peptidyl-prolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (188 aa)
     
      0.497
Dehly_0505
Peptidyl-prolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (183 aa)
     
      0.497
Dehly_0106
RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (301 aa)
   
      0.494
Dehly_0078
Hypothetical protein (348 aa)
 
          0.481
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (400 aa)
     
        0.461
Dehly_0869
Peptidase M50 (372 aa)
   
        0.443
nfi
Deoxyribonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3’ to a deoxyinosine leaving behind the intact lesion on the nicked DNA (224 aa)
   
        0.427
Dehly_0871
Peptidase M50 (361 aa)
   
        0.425
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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