• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Dehly_1506 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1506" - KEGG: mbn:Mboo_0865 C_GCAxxG_C_C family protein in Dehalogenimonas lykanthroporepellens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_1506KEGG- mbn-Mboo_0865 C_GCAxxG_C_C family protein; TIGRFAM- C_GCAxxG_C_C family protein; PFAM- C_GCAxxG_C_C family protein (168 aa)    
Predicted Functional Partners:
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily (340 aa)
   
   
  0.722
Dehly_1505
KEGG- dev-DhcVS_47 DNA polymerase III, delta subunit; TIGRFAM- DNA polymerase III, delta subunit; PFAM- DNA polymerase III delta (336 aa)
 
          0.640
Dehly_1044
TIGRFAM- selenium metabolism protein YedF; KEGG- sat-SYN_01072 putative cytoplasmic protein; Belongs to the sulfur carrier protein TusA family (193 aa)
 
          0.580
Dehly_1042
PFAM- 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG- dba-Dbac_1927 2-hydroxyglutaryl-CoA dehydratase D-component (424 aa)
 
          0.561
argG
TIGRFAM- argininosuccinate synthase; KEGG- det-DET1260 argininosuccinate synthase; PFAM- argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily (401 aa)
   
   
  0.533
argH
KEGG- deh-cbdb_A1185 argininosuccinate lyase; TIGRFAM- argininosuccinate lyase; PFAM- fumarate lyase (457 aa)
   
   
  0.522
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl- L-glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily (257 aa)
   
 
  0.423
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
Server load: low (12%) [HD]