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Dehly_1509 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1509" - UspA domain-containing protein in Dehalogenimonas lykanthroporepellens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_1509UspA domain-containing protein (144 aa)    
Predicted Functional Partners:
Dehly_1508
TrkA-N domain-containing protein (132 aa)
              0.843
Dehly_1507
TrkA-N domain-containing protein (220 aa)
              0.838
Dehly_0557
Hypothetical protein (412 aa)
   
          0.673
Dehly_0960
Putative protein export protein (426 aa)
   
          0.646
prfC
Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP (534 aa)
              0.636
Dehly_0767
Translin (215 aa)
   
          0.628
Dehly_0345
UspA domain-containing protein (285 aa)
   
          0.561
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (285 aa)
 
          0.477
Dehly_0902
Hypothetical protein (262 aa)
   
          0.466
Dehly_1511
Metallophosphoesterase (245 aa)
              0.459
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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