STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ26925.1KEGG: sfu:Sfum_3825 hypothetical protein. (349 aa)    
Predicted Functional Partners:
ADJ26923.1
KEGG: sfu:Sfum_3827 PaaR repeat-containing protein.
 
   
 0.955
ADJ26928.1
KEGG: dde:Dde_0938 phage protein D-like.
 
   
 0.954
ADJ26919.1
PFAM: GPW/gp25 family protein; KEGG: dde:Dde_0946 phage baseplate assembly protein W-like.
 
  
 0.953
ADJ26926.1
PFAM: protein of unknown function DUF1353; KEGG: dde:Dde_0940 hypothetical protein.
 
     0.952
ADJ26921.1
KEGG: dde:Dde_1877 hypothetical protein.
 
    0.947
ADJ26927.1
PFAM: Peptidase M15A; KEGG: sfu:Sfum_3823 peptidase M15A.
 
     0.926
ADJ26918.1
PFAM: Baseplate J family protein; KEGG: dde:Dde_1874 hypothetical protein.
 
   
 0.904
ADJ26932.1
KEGG: sfu:Sfum_3818 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region.
 
     0.891
ADJ26908.1
PFAM: AIG2 family protein; KEGG: sfu:Sfum_3843 hypothetical protein.
 
     0.827
ADJ26935.1
PFAM: tail sheath protein; KEGG: sfu:Sfum_3815 phage tail sheath protein.
 
   
 0.796
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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