STRINGSTRING
Dehly_1685 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1685" - Integrase family protein in Dehalogenimonas lykanthroporepellens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_1685Integrase family protein (304 aa)    
Predicted Functional Partners:
Dehly_0689
Integrase family protein (328 aa)
   
0.935
Dehly_0977
Tyrosine recombinase XerD (303 aa)
   
0.935
Dehly_1684
Hypothetical protein (124 aa)
              0.884
Dehly_1683
Hypothetical protein (64 aa)
              0.783
Dehly_1678
Phage head morphogenesis protein (287 aa)
 
          0.644
Dehly_1654
Phage tail tape measure protein (1211 aa)
 
          0.601
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (166 aa)
   
 
  0.570
Dehly_1682
Hypothetical protein (90 aa)
              0.567
Dehly_1681
Hypothetical protein (92 aa)
              0.567
Dehly_1680
Hypothetical protein (507 aa)
              0.567
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
Server load: low (7%) [HD]