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Dehly_1712 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1712" - KEGG: deg:DehalGT_1172 DNA repair protein RadC in Dehalogenimonas lykanthroporepellens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dehly_1712KEGG- deg-DehalGT_1172 DNA repair protein RadC; TIGRFAM- DNA repair protein RadC; PFAM- DNA repair protein RadC; Belongs to the UPF0758 family (263 aa)    
Predicted Functional Partners:
Dehly_0037
KEGG- det-DET0024 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM- DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM- ComEC/Rec2-related protein (792 aa)
 
   
  0.786
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (562 aa)
 
   
  0.782
Dehly_0516
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (362 aa)
         
  0.756
Dehly_0691
Manually curated; TIGRFAM- DNA protecting protein DprA; KEGG- dev-DhcVS_625 Rossmann fold DNA uptake nucleotide-binding protein; PFAM- SMF family protein (362 aa)
   
   
  0.673
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (161 aa)
              0.637
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) (236 aa)
              0.623
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (852 aa)
 
          0.617
Dehly_1715
PFAM- phosphoribosyltransferase; KEGG- det-DET1458 ComF family protein, putative (230 aa)
 
        0.596
Dehly_1621
PFAM- SMF family protein; KEGG- dma-DMR_24790 smf protein (322 aa)
   
   
  0.557
cysS
Cysteine--tRNA ligase; KEGG- dev-DhcVS_61 cysteinyl-tRNA synthetase; TIGRFAM- cysteinyl-tRNA synthetase; PFAM- Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; Belongs to the class-I aminoacyl-tRNA synthetase family (482 aa)
              0.528
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
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