STRINGSTRING
Dehly_1714 protein (Dehalogenimonas lykanthroporepellens) - STRING interaction network
"Dehly_1714" - Ribosomal subunit interface protein in Dehalogenimonas lykanthroporepellens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dehly_1714Ribosomal subunit interface protein (178 aa)    
Predicted Functional Partners:
Dehly_1715
Phosphoribosyltransferase (230 aa)
 
     
  0.873
Dehly_1716
Hypothetical protein (74 aa)
              0.736
Dehly_1713
methylated-DNA--protein-cysteine methyltransferase (171 aa)
              0.558
Dehly_1717
Hypothetical protein (213 aa)
              0.516
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (209 aa)
 
          0.497
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (264 aa)
 
          0.490
Dehly_0869
Peptidase M50 (372 aa)
   
        0.441
Dehly_1120
Sodium/hydrogen exchanger (565 aa)
   
        0.418
Dehly_0556
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (327 aa)
   
        0.416
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (547 aa)
              0.414
Your Current Organism:
Dehalogenimonas lykanthroporepellens
NCBI taxonomy Id: 552811
Other names: Chloroflexi bacterium BL-DC-8, Chloroflexi bacterium BL-DC-9, D. lykanthroporepellens, D. lykanthroporepellens BL-DC-9, Dehalogenimonas, Dehalogenimonas lykanthroporepellens, Dehalogenimonas lykanthroporepellens BL-DC-9, Dehalogenimonas lykanthroporepellens str. BL-DC-9, Dehalogenimonas lykanthroporepellens strain BL-DC-9
Server load: low (3%) [HD]