STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK95463.1Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. (453 aa)    
Predicted Functional Partners:
ADK95334.1
Bacterial sugar transferase; Identified by match to protein family HMM PF02397.
  
 0.969
ADK95692.1
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321.
 
  
 0.921
ADK96257.1
ATP-grasp domain protein; Identified by match to protein family HMM PF02655.
 
     0.908
ADK95823.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
  
 0.837
ADK96394.1
Hypothetical protein.
 
    0.824
ADK95637.1
Hypothetical protein.
 
    0.823
ADK96531.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370.
  
  
 0.819
ADK95288.1
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein; Identified by match to protein family HMM PF00278; match to protein family HMM PF02784.
  
    0.779
ADK95861.1
Oxidoreductase, aldo/keto reductase family protein; Identified by match to protein family HMM PF00248.
       0.773
ADK95941.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
  
 0.670
Your Current Organism:
Prevotella melaninogenica
NCBI taxonomy Id: 553174
Other names: P. melaninogenica ATCC 25845, Prevotella melaninogenica ATCC 25845, Prevotella melaninogenica CCUG 4944 B, Prevotella melaninogenica CIP 105346, Prevotella melaninogenica JCM 6325, Prevotella melaninogenica str. ATCC 25845, Prevotella melaninogenica strain ATCC 25845
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.