STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK96773.1BNR/Asp-box repeat protein; Identified by match to protein family HMM PF02012. (464 aa)    
Predicted Functional Partners:
ADK96067.1
Alpha-galactosidase; Identified by match to protein family HMM PF02065.
  
  
  0.913
ADK96650.1
Glucosamine-6-phosphate deaminase-like protein; Identified by match to protein family HMM PF01182; match to protein family HMM PF02585.
  
  
 0.802
ADK97334.1
Hypothetical protein.
 
  
 0.801
ADK97466.1
Dihydrodipicolinate synthetase family; Identified by match to protein family HMM PF00701; Belongs to the DapA family.
 
   
 0.777
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
  
  
 0.730
ADK96814.1
Identified by match to protein family HMM PF01344; match to protein family HMM PF07646; match to protein family HMM TIGR03548.
 
     0.721
ADK96823.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
       0.669
ADK95239.1
Arylsulfatase; Identified by match to protein family HMM PF00884.
  
 
   0.651
ADK95899.1
N-acylglucosamine 2-epimerase; Identified by match to protein family HMM PF07221.
 
     0.644
ADK95740.1
Identified by match to protein family HMM PF00657; match to protein family HMM PF03629.
 
    0.631
Your Current Organism:
Prevotella melaninogenica
NCBI taxonomy Id: 553174
Other names: P. melaninogenica ATCC 25845, Prevotella melaninogenica ATCC 25845, Prevotella melaninogenica CCUG 4944 B, Prevotella melaninogenica CIP 105346, Prevotella melaninogenica JCM 6325, Prevotella melaninogenica str. ATCC 25845, Prevotella melaninogenica strain ATCC 25845
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.