STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g12411Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (538 aa)    
Predicted Functional Partners:
B7463_g1973
Uncharacterized protein.
 
 0.957
B7463_g4288
Uncharacterized protein.
 
 0.948
B7463_g671
Uncharacterized protein.
 
 0.946
B7463_g3686
Uncharacterized protein.
 
 0.931
B7463_g5522
Uncharacterized protein.
 
 0.922
B7463_g12135
Uncharacterized protein.
  
 0.915
B7463_g3813
Uncharacterized protein.
  
 0.915
B7463_g2327
Flavodoxin-like domain-containing protein.
  
 
 0.913
B7463_g1731
Glutamine amidotransferase type-1 domain-containing protein.
    
 0.906
B7463_g8496
Tryptophan synthase.
    
 0.891
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.