STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g11016MSP domain-containing protein. (285 aa)    
Predicted Functional Partners:
B7463_g12141
Uncharacterized protein; Belongs to the OSBP family.
    
 0.960
B7463_g9678
Uncharacterized protein.
    
 0.960
B7463_g1581
Uncharacterized protein.
   
 0.888
B7463_g1046
t-SNARE coiled-coil homology domain-containing protein.
    
 0.742
B7463_g11850
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.739
B7463_g3944
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
    
 0.733
B7463_g5179
V-SNARE coiled-coil homology domain-containing protein.
    
 0.730
B7463_g4824
Uncharacterized protein.
   
 
 0.723
B7463_g9077
t-SNARE coiled-coil homology domain-containing protein.
    
 0.718
B7463_g2782
t-SNARE coiled-coil homology domain-containing protein.
    
 0.718
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.