STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g9736Uncharacterized protein; Belongs to the synaptobrevin family. (244 aa)    
Predicted Functional Partners:
B7463_g159
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.984
B7463_g481
SH3 domain-containing protein.
     
 0.952
B7463_g6581
V-SNARE domain-containing protein.
    
 0.934
B7463_g3896
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.930
B7463_g9077
t-SNARE coiled-coil homology domain-containing protein.
    
 0.914
B7463_g2782
t-SNARE coiled-coil homology domain-containing protein.
    
 0.914
B7463_g9652
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.908
B7463_g5058
Uncharacterized protein.
    
 
 0.898
B7463_g9742
Uncharacterized protein.
 
      0.884
B7463_g5179
V-SNARE coiled-coil homology domain-containing protein.
    
0.851
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.