STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g9030STAS domain-containing protein. (1263 aa)    
Predicted Functional Partners:
B7463_g12780
STAS domain-containing protein.
    
 
 0.828
B7463_g7873
STAS domain-containing protein.
    
 
 0.622
B7463_g4479
Glutamine synthetase.
   
 
 0.617
B7463_g3516
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
   
 
 0.617
B7463_g2752
Uncharacterized protein.
   
   0.591
B7463_g2055
Uncharacterized protein.
   
   0.591
B7463_g5439
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
   
   0.587
B7463_g10912
Protein-serine-threonine phosphatase/Protein-tyrosine-phosphatase/4-nitrophenylphosphatase.
   
   0.582
B7463_g9559
Zn(2)-C6 fungal-type domain-containing protein.
  
 
 0.554
B7463_g8384
Zn(2)-C6 fungal-type domain-containing protein.
  
 
 0.554
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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