STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g7889Malate dehydrogenase. (341 aa)    
Predicted Functional Partners:
B7463_g3682
Citrate synthase; Belongs to the citrate synthase family.
  
 0.959
B7463_g3523
Citrate synthase; Belongs to the citrate synthase family.
  
 0.959
B7463_g10939
Aspartate aminotransferase.
   
 0.958
B7463_g2720
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.942
B7463_g12525
Citrate synthase; Belongs to the citrate synthase family.
  
 0.940
B7463_g12023
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
  
 0.918
B7463_g3458
Aspartate aminotransferase.
   
 0.913
B7463_g7498
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
  
 
 0.908
B7463_g5515
4Fe-4S ferredoxin-type domain-containing protein.
  
 0.907
B7463_g4941
Citrate_bind domain-containing protein.
  
 0.901
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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