STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g6811Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
B7463_g12658
Amidohydro-rel domain-containing protein.
 
     0.937
B7463_g7627
Phenylalanine ammonia-lyase.
  
 
 0.737
B7463_g1233
PNP_UDP_1 domain-containing protein.
    
 0.730
B7463_g6582
Uncharacterized protein.
  
 
 0.635
B7463_g4202
FAD-binding PCMH-type domain-containing protein.
  
 
 0.635
B7463_g5969
Metallophos domain-containing protein.
     
 0.630
B7463_g12685
Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
  
 
 0.627
B7463_g12794
Uncharacterized protein.
   
 
  0.547
B7463_g2605
GTP_cyclohydro2 domain-containing protein.
   
 
  0.547
B7463_g2457
Uncharacterized protein.
   
 
  0.547
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.