STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g6308Uncharacterized protein. (262 aa)    
Predicted Functional Partners:
B7463_g8496
Tryptophan synthase.
  
 
 0.876
B7463_g12411
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.840
B7463_g283
Uncharacterized protein.
  
 0.840
B7463_g8150
PALP domain-containing protein.
  
 0.809
B7463_g2855
PALP domain-containing protein.
  
 0.809
B7463_g8059
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.797
B7463_g2772
Aminotran_1_2 domain-containing protein.
  
 0.797
B7463_g11731
Meth_synt_2 domain-containing protein.
  
 
 0.756
B7463_g10241
Uncharacterized protein.
  
 
 0.756
B7463_g995
Homoserine dehydrogenase.
  
 
 0.749
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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