STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g2847RmlD_sub_bind domain-containing protein. (319 aa)    
Predicted Functional Partners:
B7463_g11829
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
   
 0.982
B7463_g8610
Uncharacterized protein.
   
 0.906
B7463_g12378
PX domain-containing protein.
 
  
   0.904
B7463_g1476
SE domain-containing protein.
   
 
 0.842
B7463_g10345
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.837
B7463_g12012
Uncharacterized protein.
   
 
 0.821
B7463_g11697
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.814
B7463_g11087
Uncharacterized protein.
   
 0.814
B7463_g5480
BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.806
B7463_g5619
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.801
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.