STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g2282Choline_kin_N domain-containing protein. (841 aa)    
Predicted Functional Partners:
B7463_g9171
WD_REPEATS_REGION domain-containing protein.
    
 0.971
B7463_g11008
WD_REPEATS_REGION domain-containing protein.
    
 0.904
B7463_g7656
CTP_transf_like domain-containing protein.
   
 
 0.878
B7463_g6678
Uncharacterized protein; Belongs to the complex I 20 kDa subunit family.
     
 0.877
B7463_g5615
FAD-binding PCMH-type domain-containing protein.
    
 0.857
B7463_g359
Uncharacterized protein.
     
0.857
B7463_g2110
Uncharacterized protein.
    
 0.855
B7463_g10119
Uncharacterized protein.
    
 0.845
B7463_g12200
HRDC domain-containing protein.
    
 0.826
B7463_g2695
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.826
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.