STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g986Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
B7463_g1070
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.916
B7463_g2915
Uncharacterized protein.
   
 0.880
B7463_g10681
Uncharacterized protein.
     
 0.788
B7463_g1702
Uncharacterized protein.
    
 0.771
B7463_g9157
DNA polymerase.
    
 0.768
B7463_g9714
Uncharacterized protein.
     
 0.760
B7463_g9019
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.760
B7463_g5112
Uncharacterized protein.
    
 0.712
B7463_g4783
CBM21 domain-containing protein.
   
 0.686
B7463_g5122
Glyco_transf_20 domain-containing protein.
    
 0.671
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.