STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPER_12428H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (204 aa)    
Predicted Functional Partners:
MPER_00676
Uncharacterized protein.
   
 
 0.999
MPER_02159
TruB_N domain-containing protein.
   
 0.999
MPER_12950
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.999
MPER_00504
Uncharacterized protein.
    
 0.982
MPER_00189
Uncharacterized protein.
   
 0.980
MPER_05480
Uncharacterized protein.
   
 0.980
MPER_06317
Ribosomal_L7Ae domain-containing protein.
  
 0.980
MPER_10402
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.980
MPER_15546
Uncharacterized protein.
   
 0.978
MPER_08245
Nop domain-containing protein.
  
 
 0.952
Your Current Organism:
Moniliophthora perniciosa
NCBI taxonomy Id: 554373
Other names: M. perniciosa FA553, Moniliophthora perniciosa FA553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.