STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG76842.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
EEG76840.1
PFAM: regulatory protein TetR; KEGG: amt:Amet_4671 transcriptional regulator, TetR family.
       0.746
EEG76841.1
Hypothetical protein.
      
0.746
EEG76843.1
KEGG: aoe:Clos_2452 asparagine synthase (glutamine-hydrolyzing).
       0.470
EEG76839.1
KEGG: fnu:FN0456 hypothetical cytosolic protein.
       0.448
Your Current Organism:
Dethiobacter alkaliphilus
NCBI taxonomy Id: 555088
Other names: D. alkaliphilus AHT 1, Dethiobacter alkaliphilus AHT 1, Dethiobacter alkaliphilus DSM 19026, Dethiobacter alkaliphilus str. AHT 1, Dethiobacter alkaliphilus strain AHT 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.