STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_06358Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1519 aa)    
Predicted Functional Partners:
TERG_00351
Uncharacterized protein.
   
 0.960
TERG_05516
Piwi domain-containing protein.
   
 0.947
TERG_08126
Uncharacterized protein.
   
 0.947
TERG_06577
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.854
TERG_07735
Ribosomal protein L19.
  
 
 0.843
TERG_02858
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.839
TERG_05360
MRP-L46 domain-containing protein.
   
 
 0.836
TERG_05183
Ribosomal protein S6.
   
 
 0.832
TERG_12171
Ribosomal protein L32.
  
   0.831
TERG_07837
Ribosomal protein S16.
  
 
 0.823
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.