STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF56758.1CF4-like protein. (499 aa)    
Predicted Functional Partners:
EKF56759.1
Peptidase; COG4942 Membrane-bound metallopeptidase.
       0.781
EKF56749.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.753
EKF55933.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.747
EKF56010.1
Hypothetical protein; COG1012 NAD-dependent aldehyde dehydrogenases.
  
 
  0.712
EKF54863.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
     
 0.704
EKF56405.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
    
  0.694
EKF54310.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
    
  0.694
EKF56642.1
COG1587 Uroporphyrinogen-III synthase.
  
     0.637
EKF56678.1
Hypothetical protein.
  
     0.635
EKF55138.1
Hypothetical protein.
  
     0.617
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.