STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55046.1COG2942 N-acyl-D-glucosamine 2-epimerase. (442 aa)    
Predicted Functional Partners:
EKF56262.1
Glycoside hydrolase family protein.
 
     0.737
EKF55283.1
Putative N-acetylneuraminate lyase (sialic acid lyase); COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
    
  0.658
EKF54844.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
    
  0.658
EKF55446.1
GDSL family lipase; COG1613 ABC-type sulfate transport system, periplasmic component.
  
     0.556
EKF55959.1
Acetylesterase; COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.442
EKF55047.1
Glycoside hydrolase family protein; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
       0.436
EKF55045.1
Hypothetical protein.
       0.431
EKF55035.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.