STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FR74_PHATCPredicted protein. (144 aa)    
Predicted Functional Partners:
B7G101_PHATC
Absent, small, or homeotic discs 2.
    
 0.826
B7G671_PHATC
Predicted protein.
    
 0.826
B7GD09_PHATC
Predicted protein.
    
 0.742
H4-1b
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.727
B7G3C6_PHATC
Predicted protein.
   
 
 0.726
H2B-1b
Histone H2B; Belongs to the histone H2B family.
    
 0.685
UBI1/2
Ubiquitin extension protein 1/2.
    
  0.668
B7FRS2_PHATC
Predicted protein.
    
 0.667
UBI3
Ubiquitin extension protein 3.
   
  0.659
B7FY49_PHATC
Predicted protein.
    
 0.658
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.