STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FRC5_PHATCPredicted protein. (681 aa)    
Predicted Functional Partners:
B7FUI2_PHATC
Predicted protein.
    
 0.896
B7G1T7_PHATC
Predicted protein.
    
 0.619
APC6
Predicted protein.
    
 0.615
APC10
Predicted protein.
    
 0.610
B7FSY7_PHATC
Predicted protein.
   
 0.608
APC11
Predicted protein.
    
 0.574
APC2
Predicted protein; Belongs to the cullin family.
    
 0.570
B7FWC9_PHATC
RuvB-like helicase; Belongs to the RuvB family.
    
 0.549
APC7
Predicted protein.
    
  0.538
B7FUY0_PHATC
Predicted protein.
    
 0.529
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.