STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAD13-hydroxyacyl-coenzyme A dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)    
Predicted Functional Partners:
DHC1
Predicted protein.
 
      0.888
B7G4X2_PHATC
Predicted protein.
    
 0.869
B7GAE1_PHATC
Predicted protein.
    
 0.869
B7GE26_PHATC
Hydratase enyol-coa hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.760
B7FRM8_PHATC
Histone acetyltransferase.
 
 
  
 0.720
KCT3
Beta-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.684
B7FQS4_PHATC
Predicted protein.
   
  
 0.660
FAO1
Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.587
KCT1
Beta-ketoacyl-coa thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.563
B7FX61_PHATC
Enoyl-coa hydratase.
   
  0.560
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.