STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G0Y0_PHATCNon-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (385 aa)    
Predicted Functional Partners:
SMC6
Predicted protein.
   
 0.999
SMC5
Predicted protein.
   
 0.999
B7FPX6_PHATC
Predicted protein.
    
 0.999
SMC3
Predicted protein.
   
 0.922
SMC1
Predicted protein.
   
 0.901
PHATR_44165
Structural maintenance of chromosomes protein.
   
 0.862
SMC2
Structural maintenance of chromosomes protein.
   
 0.841
B7FUM0_PHATC
Mitotic cohesin.
   
 
 0.766
B7G0Q9_PHATC
Predicted protein.
   
 0.728
SUMO
Small ubiquitin-like modifier.
   
 0.728
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.