STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G253_PHATCPredicted protein. (145 aa)    
Predicted Functional Partners:
Memb11
Predicted protein.
   
 0.999
SLY1
Predicted protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.999
SybE
Predicted protein; Belongs to the synaptobrevin family.
   
 0.999
GOS
Predicted protein.
    
 0.999
SybF
Predicted protein; Belongs to the synaptobrevin family.
    
 0.999
B7FRG9_PHATC
Predicted protein.
   
 0.996
B7G657_PHATC
Predicted protein.
   
 0.968
SNAP
Predicted protein.
    
 0.926
B7G2Y5_PHATC
Predicted protein.
    
 0.818
B7G7H3_PHATC
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
   
 0.810
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.