STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G4V5_PHATCPredicted protein. (777 aa)    
Predicted Functional Partners:
B7FWC9_PHATC
RuvB-like helicase; Belongs to the RuvB family.
    
 0.578
H2A-m1
Histone H2A; Belongs to the histone H2A family.
   
 0.575
PHATR_43960
Predicted protein.
    
 0.554
B7G0F2_PHATC
Predicted protein.
   
 0.548
PHATR_44108
Predicted protein.
    
 0.546
RpoT
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.536
B7FWM6_PHATC
Predicted protein; Belongs to the actin family.
   
 0.518
ARP
Actin related protein; Belongs to the actin family.
   
 0.518
TFIIH-p44
General transcription factor IIH subunit.
    
 0.517
ERCC2
Xeroderma pigmentosum group D complementing protein.
    
 0.489
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.