STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7G702_PHATCPredicted protein. (321 aa)    
Predicted Functional Partners:
B7FZX8_PHATC
Predicted protein.
  
     0.504
FABD
Malonyl-CoA:ACP transacylase.
  
 
 0.438
PHATR_10213
Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.435
B7G8Q3_PHATC
Predicted protein.
    
 0.433
B7FQF0_PHATC
Predicted protein.
    
 0.424
B7FYU0_PHATC
3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.419
B7FSQ7_PHATC
Short-chain dehydrogenase/reductase acting with NAD or NADP as acceptor; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.417
B7FQ28_PHATC
Arylsulfatase.
   
 
 0.415
B7GBD0_PHATC
Predicted protein.
   
 
 0.415
B7GBD3_PHATC
Predicted protein.
   
 
 0.415
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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