STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7GE39_PHATCSTT3 subunit-like protein. (894 aa)    
Predicted Functional Partners:
Sec61alpha
Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family.
   
 
 0.931
B7GE38_PHATC
Oligosaccharyl transferase.
  
  
 
0.902
B7FSS8_PHATC
Predicted protein.
  
   0.781
B7G3G9_PHATC
Predicted protein.
   
   0.769
B7GAG0_PHATC
Predicted protein.
   
   0.768
PHATR_25714
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
 
 0.763
B7FPQ0_PHATC
Predicted protein.
   
 
 0.763
B7GBL1_PHATC
Predicted protein.
    
 
 0.763
B7G5I7_PHATC
Predicted protein; Belongs to the universal ribosomal protein uL22 family.
   
   0.762
PHATR_46735
Predicted protein.
   
 
 0.761
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.