STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_02463Programmed cell death protein 6. (167 aa)    
Predicted Functional Partners:
N303_09235
Protein transport protein Sec31B.
    
 
 0.807
N303_04852
Calpastatin.
    
 0.803
N303_08716
Programmed cell death 6-interacting protein.
    
 
 0.768
N303_04941
Heme-binding protein 2.
    
   0.717
N303_06823
Androglobin.
   
 0.635
N303_14294
Calpain-1 catalytic subunit; Belongs to the peptidase C2 family.
   
0.635
N303_07849
Calpain-5; Belongs to the peptidase C2 family.
   
 0.635
N303_10942
Calpain-7; Belongs to the peptidase C2 family.
   
 0.635
N303_06452
Kelch-like 12.
    
 
 0.635
N303_10275
Calpain-10; Belongs to the peptidase C2 family.
   
 0.635
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.