STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_10945Methyltransferase-like 6. (268 aa)    
Predicted Functional Partners:
N303_06579
Ribosome biogenesis protein TSR3.
 
 
  
 0.738
N303_13037
Putative methyltransferase NSUN5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
 
  
 0.707
N303_02431
E3 ubiquitin-protein ligase TRIP12.
    
   0.561
N303_10946
ELL-associated factor 1.
      
 0.533
N303_11584
Ras-related and estrogen-regulated growth inhibitor.
      
 0.516
N303_14876
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.487
N303_04864
tRNA methyltransferase 10 B.
   
  
 0.487
N303_10358
RING finger and SPRY domain-containing protein 1.
   
  
 0.476
N303_06003
Thyroid hormone receptor-associated protein 3.
      
 0.474
N303_09598
Uncharacterized protein.
      
 0.450
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.