STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_04403F-box/LRR-repeat protein 16. (431 aa)    
Predicted Functional Partners:
N303_04402
F-box/LRR-repeat protein 16.
 
     0.922
N303_10926
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.860
N303_04532
Cullin-3; Belongs to the cullin family.
    
 0.796
N303_02847
RING-box protein 1.
    
 0.737
N303_05153
CDK2-associated and cullin domain-containing protein 1; Belongs to the cullin family.
    
 0.730
N303_14744
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.722
N303_04282
COMM domain-containing protein 4.
    
 0.679
N303_02434
RING-box protein 2.
    
 0.652
N303_09517
Cullin-associated NEDD8-dissociated protein 1.
    
 0.638
N303_09770
Cryptochrome-1.
    
 0.615
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.