STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_06884Autophagy-related protein 3. (292 aa)    
Predicted Functional Partners:
N303_04813
Ubiquitin-like ATG12.
    
 0.998
N303_13524
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.995
N303_10402
Gamma-aminobutyric acid receptor-associated protein-like 2.
  
 0.993
N303_01480
Gamma-aminobutyric acid receptor-associated protein-like 1.
  
 0.992
N303_03150
Autophagy-related protein 16-1.
   
 0.991
N303_02166
Serine/threonine-protein kinase ULK1.
   
 
 0.948
N303_12447
Serine/threonine-protein kinase ULK2.
   
 
 0.935
N303_08511
CASP8 and FADD-like apoptosis regulator; Belongs to the peptidase C14A family.
    
 0.930
N303_00567
Beclin-1.
   
 0.929
N303_10631
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.914
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.