STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_09049Nucleolar protein 10. (667 aa)    
Predicted Functional Partners:
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.999
N303_14005
WD repeat-containing protein 36.
   
 
 0.999
N303_14026
Ribosome biogenesis protein BMS1.
   
 
 0.999
N303_02162
Nucleolar complex protein 4.
   
 
 0.998
N303_14982
Periodic tryptophan protein 2.
   
 
 0.998
N303_14850
Nucleolar protein 6.
   
 
 0.998
N303_06498
U3 small nucleolar RNA-associated protein 14 A.
   
 
 0.998
N303_11095
Bystin.
   
 
 0.998
N303_15647
U3 small nucleolar RNA-associated protein 6.
   
 
 0.997
N303_08425
U3 small nucleolar ribonucleoprotein MPP10.
   
   0.996
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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