STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_13568Density-regulated protein; Belongs to the DENR family. (198 aa)    
Predicted Functional Partners:
N303_00350
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.992
N303_08005
Malignant T-cell-amplified sequence 1.
   
 
 0.989
N303_03511
Eukaryotic translation initiation factor 1A, Y-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
 0.964
N303_04141
Eukaryotic translation initiation factor 3 subunit G.
   
 0.956
N303_08272
Eukaryotic translation initiation factor 3 subunit J.
   
 0.953
N303_07098
Eukaryotic translation initiation factor 3 subunit B.
   
 0.951
N303_05152
Eukaryotic translation initiation factor 3 subunit A.
   
 0.950
N303_12686
Eukaryotic translation initiation factor 3 subunit I.
   
 0.946
N303_09865
Eukaryotic translation initiation factor 3 subunit D; Belongs to the eIF-3 subunit D family.
   
 0.936
N303_07003
Eukaryotic translation initiation factor 3 subunit E; Belongs to the eIF-3 subunit E family.
   
 0.935
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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