STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_12232Exosome complex component RRP45. (419 aa)    
Predicted Functional Partners:
N303_14178
Exosome complex component CSL4.
   
 0.999
N303_14018
Exosome complex component RRP40.
   
 0.999
N303_02198
Exosome complex component RRP42.
  
0.999
N303_10200
Exosome complex component RRP43.
   
0.999
N303_06131
Exosome complex component RRP4.
   
 0.999
N303_00872
Superkiller viralicidic activity 2-like 2.
   
 0.998
N303_01243
Nuclear nucleic acid-binding protein C1D.
   
 0.998
N303_02584
Exosome component 10.
   
 0.998
N303_01886
DIS3-like exonuclease 1; Belongs to the RNR ribonuclease family.
   
 0.994
N303_06408
HBS1-like.
   
 0.988
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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