STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHK_01656CBS domain containing protein. (369 aa)    
Predicted Functional Partners:
LHK_01655
Hypothetical protein.
       0.671
LHK_01653
Periplasmic serine proteases (ClpP class).
  
    0.472
LHK_01657
Phage baseplate-like protein.
       0.472
LHK_01658
Phage portal protein, lambda family.
       0.472
LHK_01652
Hypothetical protein.
       0.470
LHK_01654
Hypothetical protein.
       0.470
LHK_01651
Putative capsid protein of prophage.
       0.469
LHK_01659
Hypothetical protein.
       0.466
LHK_01661
Phage terminase GpA.
       0.466
LHK_01662
Terminase small subunit.
       0.466
Your Current Organism:
Laribacter hongkongensis
NCBI taxonomy Id: 557598
Other names: L. hongkongensis HLHK9, Laribacter hongkongensis HLHK9, Laribacter hongkongensis str. HLHK9, Laribacter hongkongensis strain HLHK9
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