Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LHK_01084 | cobD | LHK_01084 | LHK_02548 | Putative Methyltransferase. | Probable cobalamin biosynthesis transmembrane protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.591 |
LHK_01084 | cobS | LHK_01084 | LHK_03216 | Putative Methyltransferase. | CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.608 |
LHK_01084 | cobT | LHK_01084 | LHK_03224 | Putative Methyltransferase. | CobT; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.509 |
LHK_01084 | cobU | LHK_01084 | LHK_03222 | Putative Methyltransferase. | CobU; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.516 |
LHK_01416 | cobD | LHK_01416 | LHK_02548 | ATP:cob(I)alamin adenosyltransferase, putative; Belongs to the Cob(I)alamin adenosyltransferase family. | Probable cobalamin biosynthesis transmembrane protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.921 |
LHK_01416 | cobS | LHK_01416 | LHK_03216 | ATP:cob(I)alamin adenosyltransferase, putative; Belongs to the Cob(I)alamin adenosyltransferase family. | CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.928 |
LHK_01416 | cobU | LHK_01416 | LHK_03222 | ATP:cob(I)alamin adenosyltransferase, putative; Belongs to the Cob(I)alamin adenosyltransferase family. | CobU; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.926 |
LHK_02552 | LHK_02879 | LHK_02552 | LHK_02879 | Probable ABC transporter ATP-binding protein. | Probable ZipA related protein, possibly involved in cell division; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | 0.758 |
LHK_02552 | LHK_03254 | LHK_02552 | LHK_03254 | Probable ABC transporter ATP-binding protein. | Hypothetical protein. | 0.667 |
LHK_02552 | cobD | LHK_02552 | LHK_02548 | Probable ABC transporter ATP-binding protein. | Probable cobalamin biosynthesis transmembrane protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.594 |
LHK_02879 | LHK_02552 | LHK_02879 | LHK_02552 | Probable ZipA related protein, possibly involved in cell division; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Probable ABC transporter ATP-binding protein. | 0.758 |
LHK_02879 | LHK_02938 | LHK_02879 | LHK_02938 | Probable ZipA related protein, possibly involved in cell division; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Sporulation related. | 0.492 |
LHK_02879 | LHK_03254 | LHK_02879 | LHK_03254 | Probable ZipA related protein, possibly involved in cell division; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Hypothetical protein. | 0.757 |
LHK_02879 | cobD | LHK_02879 | LHK_02548 | Probable ZipA related protein, possibly involved in cell division; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Probable cobalamin biosynthesis transmembrane protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.579 |
LHK_02938 | LHK_02879 | LHK_02938 | LHK_02879 | Sporulation related. | Probable ZipA related protein, possibly involved in cell division; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | 0.492 |
LHK_02938 | LHK_03254 | LHK_02938 | LHK_03254 | Sporulation related. | Hypothetical protein. | 0.445 |
LHK_02938 | cobD | LHK_02938 | LHK_02548 | Sporulation related. | Probable cobalamin biosynthesis transmembrane protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.574 |
LHK_03254 | LHK_02552 | LHK_03254 | LHK_02552 | Hypothetical protein. | Probable ABC transporter ATP-binding protein. | 0.667 |
LHK_03254 | LHK_02879 | LHK_03254 | LHK_02879 | Hypothetical protein. | Probable ZipA related protein, possibly involved in cell division; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | 0.757 |
LHK_03254 | LHK_02938 | LHK_03254 | LHK_02938 | Hypothetical protein. | Sporulation related. | 0.445 |
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