STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmECytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (177 aa)    
Predicted Functional Partners:
ccmC
Cytochrome c-type biogenesis protein/heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
 
 0.985
ccmF
Cytochrome c-type biogenesis protein CcmF; COG:O;COG1138.
 
 
 0.967
ccmB
Cytochrome c-type biogenesis protein/heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
 
 
 0.962
ccmA
Cytochrome c biogenesis ATP-binding export protein ccmA/heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
 
 
 0.880
ccmH_1
Cytochrome C-type biogenesis protein; Possible subunit of a heme lyase.
 
  
 0.856
nfrE
Cytochrome c-type biogenesis protein; COG:O;COG1138.
 
 
 0.855
ccmD
Cytochrome c-type biogenesis protein/heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
 
 
 0.849
dsbE-2
Thiol-disulfide interchange protein; COG:OC;COG0526.
 
  
 0.825
dsbE
Thiol:disulfide interchange protein DsbE; COG:OC;COG0526.
 
  
 0.815
ccmH
Cytochrome c-type biogenesis protein ccmH precursor; Possible subunit of a heme lyase.
 
  
 0.810
Your Current Organism:
Glaesserella parasuis
NCBI taxonomy Id: 557723
Other names: G. parasuis SH0165, Glaesserella parasuis SH0165, Haemophilus parasuis SH0165
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