STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_035268-amino-7-oxononanoate synthase. (413 aa)    
Predicted Functional Partners:
BDCG_03528
Biotin synthase.
 
 0.938
BDCG_03527
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, variant 1.
  
  
 0.923
BDCG_07611
Tryptophan synthase.
    
 0.845
BDCG_04913
Alcohol dehydrogenase.
  
 
 0.833
BDCG_01254
N,N-dimethylglycine oxidase.
  
 0.775
BDCG_03962
FAD dependent oxidoreductase.
  
 0.775
BDCG_06321
Phosphoethanolamine transferase PIGF.
     
 0.770
BDCG_08432
Oxidoreductase.
     
 0.770
BDCG_03182
Alanine-glyoxylate transaminase/(R)-3-amino-2-methylpropionate-pyruvate transaminase.
    
 0.755
BDCG_09426
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.752
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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