STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_04527WD domain-containing protein. (934 aa)    
Predicted Functional Partners:
BDCG_01872
Ran-binding protein.
   
 
 0.989
BDCG_00053
CTLH domain-containing protein.
    
 
 0.958
BDCG_01412
CTLH domain-containing protein.
   
 
 0.950
BDCG_03507
E3 ubiquitin-protein ligase TRIP12.
   
  
 0.922
BDCG_03544
Uncharacterized protein.
   
 
 0.802
BDCG_04965
Protein SSH4.
   
 
 0.802
BDCG_08416
Vesicle-mediated transporter Vid24.
    
 
 0.796
BDCG_05315
Protein FYV10.
    
 
 0.697
BDCG_00492
Uncharacterized protein.
   
 
 0.677
BDCG_00512
Protein yippee-like; Belongs to the yippee family.
   
 
 0.677
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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