STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_06730GTPase-activating protein GYP7. (820 aa)    
Predicted Functional Partners:
BDCG_05207
Ras-like protein Rab7.
   
 0.946
BDCG_05700
Autophagy-related protein.
   
 0.921
BDCG_07600
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.839
BDCG_09351
GTP-binding protein ypt2.
 
  
 0.730
BDCG_09360
Uncharacterized protein.
    
 0.730
BDCG_07079
GTP-binding protein ypt1.
 
   
 0.656
BDCG_03550
Rab.
    
 0.654
BDCG_05372
Ras small monomeric GTPase.
     
 0.637
BDCG_05378
Anucleate primary sterigmata protein ApsB, variant.
     
 0.637
BDCG_02944
Uncharacterized protein.
  
 
 
 0.531
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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