STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_07764Lysine--tRNA ligase. (609 aa)    
Predicted Functional Partners:
BDCG_01031
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.965
BDCG_06184
Prolyl-tRNA synthetase.
  
 0.934
BDCG_08395
Leucyl-tRNA synthetase.
  
 0.933
BDCG_01409
Lysyl-tRNA synthetase.
  
  
 
0.928
BDCG_00882
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.927
BDCG_06173
tRNA-binding protein.
  
 0.903
BDCG_03075
Peptidyl-tRNA hydrolase domain-containing protein.
  
 
 0.892
BDCG_04994
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.883
BDCG_05276
Glutaminyl-tRNA synthetase, variant; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.883
BDCG_05261
Elongation factor 1-gamma; Belongs to the GST superfamily.
   
 0.877
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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