STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_01157Rhomboid domain-containing protein. (266 aa)    
Predicted Functional Partners:
TERG_01152
Uncharacterized protein.
 
 
    0.900
TERG_05378
Cell division control protein 48; Belongs to the AAA ATPase family.
    
 
 0.728
TERG_08217
Glycos_transf_1 domain-containing protein.
   
 
  0.666
TERG_08546
Uncharacterized protein.
    
 
 0.632
TERG_03304
AAA domain-containing protein.
    
 
 0.582
TERG_03763
AAA domain-containing protein.
    
 
 0.582
TERG_00615
BHLH domain-containing protein.
    
 
 0.520
TERG_02890
Rhomboid domain-containing protein.
      
 0.499
TERG_06152
Uncharacterized protein.
    
   0.465
TERG_00132
Uncharacterized protein.
   
  
 0.463
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.