STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_02236DNA mismatch repair protein MSH3. (486 aa)    
Predicted Functional Partners:
TERG_00930
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.999
TERG_06906
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
0.987
TERG_12335
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.965
TERG_11789
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
0.955
TERG_04334
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.954
TERG_05158
Mlh1_C domain-containing protein.
  
 0.950
TERG_11788
Uncharacterized protein.
 
 
 0.949
TERG_05382
PX domain-containing protein.
    
   0.947
TERG_03581
Uncharacterized protein.
 
 0.918
TERG_05552
DNA_mis_repair domain-containing protein.
  
 0.886
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.